Cava Claudia
Bio sketch
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Laurea specialistica in Bioinformatica
Dottorato in Bioinformatica
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ORCID ID: 0000-0002-5540-4104
Scopus Author ID: 6507266051
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Temi di Ricerca
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– Sviluppo di metodi e applicazioni computazionali avanzati per l’integrazione di dati omiciÂ
– Studio dei meccanismi di regolazione dell’espressione genica
– Approcci di system biology per la caratterizzazione di network biologici
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Collaborazioni Nazionali
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IRCCS Fondazione Salvatore Maugeri, Milano
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Bibliografia recente di maggior rilevanza
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Cava C, Bertoli G, Castiglioni I. In Silico Discovery of Candidate Drugs against Covid-19. Viruses. 2020;12(4):E404. Published 2020 Apr 6. doi:10.3390/v12040404
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Colaprico A, Olsen C, Bailey MH, et al. Interpreting pathways to discover cancer driver genes with Moonlight. Nat Commun. 2020;11(1):69. Published 2020 Jan 3. doi:10.1038/s41467-019-13803-0
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Cava C, Novello C, Martelli C, Lodico A, Ottobrini L, Piccotti F, Truffi M, Corsi F, Bertoli G, Castiglioni I. Theranostics application of miR-429 in HER2+ breast cancer. Theranostics 2020; 10(1): 50-61. doi:10.7150/thno.36274
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Cantini L, Bertoli G, Cava C, Dubois T, Zinovyev A, Caselle M, Castiglioni I, Barillot E, Martignetti L. Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer. Nucleic Acids Res. 2019 Jan 18. doi: 10.1093/nar/gkz016
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Cava C, Bertoli G, Castiglioni I. In silico identification of drug target pathways in breast cancer subtypes using pathway cross-talk inhibition. J Transl Med. 2018 Jun 5;16(1):154. doi: 10.1186/s12967-018-1535-2
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Cava C, Bertoli G, Colaprico A, Olsen C, Bontempi G, Castiglioni I. Integration of multiple networks and pathways identifies cancer driver genes in pan-cancer analysis. BMC Genomics. 2018 Jan 6;19(1):25. doi: 10.1186/s12864-017-4423-x
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Cava C, Colaprico A, Bertoli G, Bontempi G, Mauri G, Castiglioni I. How interacting pathways are regulated by miRNAs in breast cancer subtypes. BMC Bioinformatics. 2016 Nov 8;17(Suppl 12):348. doi: 10.1186/s12859-016-1196-1
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Cava C, Colaprico A, Bertoli, G, Graudenzi A, Silva TC, Olsen, C, Noushmehr H, Bontempi G, Mauri G, Castiglioni I. SpidermiR: An R/Bioconductor Package for Integrative Analysis with miRNA Data. Int. J. Mol. Sci. 2017, 18, 274
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Colaprico A, Silva TC, Olsen C, Garofano L, Cava C, Garolini D, Sabedot TS, Malta TM, Pagnotta SM, Castiglioni I, Ceccarelli M, Bontempi G, Noushmehr H. TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data. Nucleic Acids Res. 2016 May 5;44(8):e71
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Cava C, Bertoli G, Ripamonti M, Mauri G, Zoppis I, Della Rosa PA, Gilardi MC, Castiglioni I. Integration of mRNA expression profile, copy number alterations, and microRNA espression levels in breast cancer to improve grade definition. Plos One. 2014; 9(5), e97681